Insertion junction: CLIP2.062542_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062542
Chromosome:chromosome 1
Location:4167080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027800 ATPVH1,ATPvH (1 of 1) K02144 - V-type H+-transporting ATPase subunit H (ATPeV1H); Vacuolar ATP synthase subunit H 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTGGCCTGACGACAAGGCCCTGCAGCAAGCCCCGTGCATGGCCCCTA
Internal bar code:TTAGTATCAAGTGCTATCGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1585
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTTCCGTCCTCAACAT
Suggested primer 2:GCTTTGTGCAGGTGTCCAAG