Insertion junction: CLIP2.062543_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062543
Chromosome:chromosome 9
Location:3460059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396065 ALK5 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Aurora-like kinase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTCAAACGTGTGCACGGAGCAAACGCGCTGCCACCCGGCGGATGGCT
Internal bar code:CACGCACGAGGCACCATTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:926
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAAGCAAACGTCCCTCTC
Suggested primer 2:AGGTGGCTGGGTTGATAACG