Insertion junction: CLIP2.062548_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062548
Chromosome:chromosome 2
Location:6311176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387500 OPR38 OctotricoPeptide Repeat protein 38 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGCCTGTTTGAATTTTTTCATGGCCCATCGGCGGCAGCCCCTGTGC
Internal bar code:GCGAATCGGCCCAATCGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:643
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTTGCAACGACAGGGCA
Suggested primer 2:GCGCGTGCTGTTGGTATAAG