Insertion junction: CLIP2.062556_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062556
Chromosome:chromosome 6
Location:4703972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279050 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGCAGCCAGGTGGAAAGCCGATCACAAAGCTTTTCAGAATGTGCGG
Internal bar code:AAAGTACGTGAATCGTACAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2387
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGCAGCACACAATCTCA
Suggested primer 2:GGAATCTGCGGACTAGGTCG