Insertion junction: CLIP2.062563_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062563
Chromosome:chromosome 17
Location:5270749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGCTGCTTGGGGAGCTGTATTGCCCAGCAACTCGGGCCAGACGGAG
Internal bar code:TATTTTTGGCTTTCATGTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1261
LEAP-Seq percent confirming:70.2703
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCTCTCTTCAGTCCCG
Suggested primer 2:GTGCTGTGATGCCCTACCTT