Insertion junction: CLIP2.062564_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062564
Chromosome:chromosome 12
Location:5190808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527050 (1 of 13) IPR001251//IPR011074 - CRAL-TRIO lipid binding domain // CRAL/TRIO, N-terminal domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAACATTAAGTTATCATAACGACCCGCTTGGAACCGCTTGGAACCCGC
Internal bar code:TCTCCCGTACGGATGAGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAAACCCATTCGCAA
Suggested primer 2:CATAGCGGGGGCTTCTATGG