Insertion junction: CLIP2.062567_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062567
Chromosome:chromosome 13
Location:2908888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583400 OPR57 OctotricoPeptide Repeat protein 57; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAGTAGGGGGCCTGCACGTTGGCAGTAAGGTATGGCTGATGAGGTCC
Internal bar code:TATAGTGATTAGACTAATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:802
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGATAGTGCTCGCAAAG
Suggested primer 2:CTAGGCATGCTGATCCTGGG