Insertion junction: CLIP2.062567_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062567
Chromosome:chromosome 13
Location:2908891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583400 OPR57 OctotricoPeptide Repeat protein 57; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACTGGGAATCGCAACTACAGCCCCCTCCCTAGGCCCCCGCATCCTGT
Internal bar code:TATAGTGATTAGACTAATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2631
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGCATGCTGATCCTGGG
Suggested primer 2:GCGTGATAGTGCTCGCAAAG