Insertion junction: CLIP2.062568_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062568
Chromosome:chromosome 3
Location:1433642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151000 SEX4,DSP8 Laforin glucan phosphatase, chloroplastic; (1 of 1) PTHR10343//PTHR10343:SF58 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTCAGAATTGTTTCGGCAGTGCTCCCGGCATGGAACCACGGCCCACC
Internal bar code:TGGTCGATTGAATGCGGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2008
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTGTTGACAATTGGCG
Suggested primer 2:GGACTATGGTATGGGCCGTG