Insertion junction: CLIP2.062570_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062570
Chromosome:chromosome 6
Location:8194986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCCGAGGACTATGGCTGTCGCCCCCCTTTGGGGGGCGAGCCAACTG
Internal bar code:GATTAGATGTCGGGTAGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2084
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTCGATGTTCCGTGGT
Suggested primer 2:TGTTGAACAGCGCACCAATG