Insertion junction: CLIP2.062571_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062571
Chromosome:chromosome 8
Location:3496964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378900 ND3,NUO3 (1 of 1) K03880 - NADH-ubiquinone oxidoreductase chain 3 (ND3); NADH:ubiquinone oxidoreductase ND3 subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGGCTGGGGCGCGGGATTCCGTGTGCGCCAGGCTTCGCGGTAGCTTA
Internal bar code:TGGCCTGTTTACGTACCTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1434
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAAATGCAACCGGGCTT
Suggested primer 2:CGAGATCGCCTACCTGTTCC