Insertion junction: CLIP2.062582_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062582
Chromosome:chromosome 11
Location:786294
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467633 (1 of 1) PTHR11918//PTHR11918:SF78 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACAGCTCTGTCCGTCTTTCGTGTCTGCGCCCCCGAAAGGCCCGCCCT
Internal bar code:TAATCGTTGTTATTGCTCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGGTCTACTTTGACGGC
Suggested primer 2:AGGTTTGACAGGTGGCACAA