Insertion junction: CLIP2.062586_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062586
Chromosome:chromosome 17
Location:5693599
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g740430 (1 of 1) IPR003663//IPR005828//IPR011701//IPR020846 - Sugar/inositol transporter // Major facilitator, sugar transporter-like // Major facilitator superfamily // Major facilitator superfamily domain intron
Cre17.g802121 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCCGCCGCCACAGGTGATGTTGTGCATTGGCATGCTGTCGGCGCC
Internal bar code:AATCACTGAGCGGTGTCGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTTGTGGCTTTTGGTA
Suggested primer 2:TGCTTCCTTACCTCACGCAG