Insertion junction: CLIP2.062608_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062608
Chromosome:chromosome 16
Location:300700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694202 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTGTGGATCGGGAAGCGCGGTGCGTGGGAACGTGTGTGGATTTGTG
Internal bar code:GTTTTGGGTCAGCTCAAGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATACATCAAAGGCAGCG
Suggested primer 2:TGACGGACTTCTTCAAGGGC