Insertion junction: CLIP2.062612_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062612
Chromosome:chromosome 11
Location:927008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467656 (1 of 9) IPR007112//IPR009009 - Expansin/pollen allergen, DPBB domain // RlpA-like double-psi beta-barrel domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGGGCTGGTAGGGAGTTGTAACCAACACCCACCAACTTGCCCACCAA
Internal bar code:CCAAACAAAGAAGTTACGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2273
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTGACCAACGCCCTTG
Suggested primer 2:GTTCTGCCTGGACGAACTCA