Insertion junction: CLIP2.062614_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062614
Chromosome:chromosome 7
Location:4846899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800841 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCAAGTCCGGCACGTGGCCGCAGCAACCGCAAAACAAGCACCCCGCCG
Internal bar code:CCATCGTATGTATAGGGCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3517
LEAP-Seq percent confirming:36.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCGATGGGCATGTATGA
Suggested primer 2:TTGCCGCCAACATAGTTTGC