Insertion junction: CLIP2.062615_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062615
Chromosome:chromosome 12
Location:6622940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539000 ECT1 (1 of 1) 2.7.7.14 - Ethanolamine-phosphate cytidylyltransferase / Phosphorylethanolamine transferase; CDP-Ethanolamine synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACACCCACTCCGACATCAGTGTCTAACTTGCTTTTGTTGGCAGCGGGA
Internal bar code:TTATACCGCTCCGTCGCATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1909
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGAACATAGCATCTCGA
Suggested primer 2:AACGGCATATGCGACAATGC