Insertion junction: CLIP2.062616_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062616
Chromosome:chromosome 6
Location:3187384
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g276200 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCACTTTGGTGACGCCCACCATCCTACCACGCGTCAGAGACCGGCCAA
Internal bar code:ATACTTGGGAACTGTTTCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5036
LEAP-Seq percent confirming:19.2857
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:113
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCTGTCTGTTGGGGAAG
Suggested primer 2:TCGACAACAGAGTGACCAGC