Insertion junction: CLIP2.062619_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062619
Chromosome:chromosome 3
Location:2826114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162000 TPT8,TPT7 UMAMIT (Usually Multiple Acids Move In and Out Transporters) type transporter; (1 of 5) PTHR11132//PTHR11132:SF101 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACTGCAATACACCCAGCTCTCACAGATGCTACAGGGCTTAATCCCTT
Internal bar code:CGTACGGTCGACTTGGACCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2079
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACAAGTGAGTGCCGTCC
Suggested primer 2:TGGGGTTTCTGTCATGTCCG