Insertion junction: CLIP2.062620_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062620
Chromosome:chromosome 1
Location:1788549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009950 NEP1 NEP1-like protein; (1 of 1) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGACAGATACGCTCAAAGGTGGGGGTGCGGGAGCCAAGGAAATGAGGT
Internal bar code:TGATATCGTTCGAATGAACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3500
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCTGACGCTGTGACTTC
Suggested primer 2:AGAATAACGCCGCTCGAGAG