Insertion junction: CLIP2.062627_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062627
Chromosome:chromosome 7
Location:4177395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342250 PFD2 Prefoldin molecular chaperone, subunit 2; (1 of 1) K09549 - prefoldin subunit 2 (PFDN2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCGGTTTGCTTCACGGCGCGTATGATTGGGGCGGGCTCTGTGCGCA
Internal bar code:CGGATAAGGTGAGTCTCAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGCAACGGTTCAACCC
Suggested primer 2:CTCCAAGTCGTAGGCGGATC