Insertion junction: CLIP2.062634_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062634
Chromosome:chromosome 6
Location:7960788
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g800745 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGAGCGCTTTTTCTACCAGGTTTGGGGCGGCAGGTCGGTTTGGAGAT
Internal bar code:CTTGTTCTCTTCGTGGCCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1952
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCAAGGGAAAAGTGGGC
Suggested primer 2:ACTCACTCTACCCTCCCGAC