Insertion junction: CLIP2.062636_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062636
Chromosome:chromosome 9
Location:272728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386759 (1 of 46) IPR000742 - EGF-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCGCATCAGGAGCACTTGTAGACCCCAGGTTGCCACCACAGAGTGC
Internal bar code:CGGTGGTCTATGAGTAAGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2590
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCATTGGCTTTGATGTGC
Suggested primer 2:ATAGACCGCATCATCGCCTG