Insertion junction: CLIP2.062638_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062638
Chromosome:chromosome 11
Location:1349652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGACTAATGTGCCAACCCCGGGACTAGGCCCTTCAAAAGATGCTCCCA
Internal bar code:ATCCACCAAGTGCTGGATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTCGGTTGCATGTGGG
Suggested primer 2:CGGGCTGACCACTACGATAC