Insertion junction: CLIP2.062638_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062638
Chromosome:chromosome 11
Location:1349656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCATGCAGGGAGCAAAGCCCGTGCCTCAAGGACAGTTCTTGCTGTGT
Internal bar code:ATCCACCAAGTGCTGGATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCTGACCACTACGATAC
Suggested primer 2:CTTTGTCGGTTGCATGTGGG