Insertion junction: CLIP2.062642_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062642
Chromosome:chromosome 15
Location:579490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636450 SMM58 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) K15190 - 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] (MEPCE, BCDIN3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTGAGGTGGCTGGCGGTTGGCGGTTTGGCGGTGGCTCAGAGGCTGGC
Internal bar code:ATGTTGTAGATATATGGCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGATACAGGTCTGGACTC
Suggested primer 2:TTTGCACACCTCACACACCT