Insertion junction: CLIP2.062645_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062645
Chromosome:chromosome 16
Location:5957563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678850 (1 of 1) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGAAGACTACGGAAGTGCTGCTTCATGAAAGACGAACTGCGTACTGT
Internal bar code:CATGAGGCGATCAACTAGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1962
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTTGGGCCCTGATAGCA
Suggested primer 2:AGCAATGGGAGCAGCAGTAG