Insertion junction: CLIP2.062645_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062645
Chromosome:chromosome 16
Location:5957569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678850 (1 of 1) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGAACCAGTGAAGCCGCCGCACAACAACACACGCGCCATTCGCGAAC
Internal bar code:CATGAGGCGATCAACTAGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4828
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAATGGGAGCAGCAGTAG
Suggested primer 2:CAAGTTGGGCCCTGATAGCA