Insertion junction: CLIP2.062648_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062648
Chromosome:chromosome 9
Location:2077531
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g396300 PPX1,PPOX (1 of 1) 1.3.3.4 - Protoporphyrinogen oxidase / Protoporphyrinogenase; Protoporphyrinogen oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGAGGAGGCAGGAGCGGAGGCAGGAGTGGAGGCAGGAGAGGAGGGGT
Internal bar code:GTTTATCAATAGTTGTCGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTGGAGCTGTAGATGG
Suggested primer 2:GACGAGGAGGAGGAGGAGTT