Insertion junction: CLIP2.062654_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062654
Chromosome:chromosome 17
Location:880043
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g702400 PUS5 (1 of 1) 3.5.4.26//5.4.99.28 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase // tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGCCGCTACGTGCGGGCATGTGCATCCGGCACTTCATCCACAGGCAC
Internal bar code:TGTTACACGAAGTCACAGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGGCTCTACACACAGGT
Suggested primer 2:ATCCCTGACTCTCTCGTGCT