Insertion junction: CLIP2.062660_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062660
Chromosome:chromosome 3
Location:898852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146567 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTATGGGCACGATTACGGCAAGCCTTCGCTGTGACTATGATTACACAC
Internal bar code:GCTAAAACTCAGATTTTAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3486
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:114
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCAAGAGCAGGTGCAGG
Suggested primer 2:TGCCCATGGTCCCTCTATCA