Insertion junction: CLIP2.062665_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062665
Chromosome:chromosome 10
Location:1306248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427200 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGCGGGTGACCGAGGTGGTAAGCCCGCACCGGTAGGCTGCGGCCTG
Internal bar code:TTAACGCCCTGATGATCGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1879
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAACAAACTTCCTGGCC
Suggested primer 2:GAGGCAATGCGCTAACATGG