Insertion junction: CLIP2.062669_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062669
Chromosome:chromosome 13
Location:1855693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575250 (1 of 1) PTHR10663:SF114 - PROTEIN MON2 HOMOLOG 5'UTR
Cre13.g575300 (1 of 1) K08876 - SCY1-like protein 1 (SCYL1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCGTGCTTGTACCCCCGATGGGGCCAAAACTTCAACCACCATCGGCC
Internal bar code:TGCTTAATAAGAGAAACCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3757
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTCTACAACGGCATGCT
Suggested primer 2:CCCCTGTATGGAAACTGCGT