Insertion junction: CLIP2.062669_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062669
Chromosome:chromosome 13
Location:1855694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575250 (1 of 1) PTHR10663:SF114 - PROTEIN MON2 HOMOLOG 5'UTR
Cre13.g575300 (1 of 1) K08876 - SCY1-like protein 1 (SCYL1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGCGACTCCCACACTCCCAGACTCCTTGAAGGCACTGCTGCGCCCC
Internal bar code:TTGATGACGCCGGCCCAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1313
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTGTATGGAAACTGCGT
Suggested primer 2:AGCTTCTACAACGGCATGCT