Insertion junction: CLIP2.062675_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062675
Chromosome:chromosome 3
Location:8338435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199090 3'UTR
Cre03.g199100 (1 of 7) IPR001606 - ARID DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGCAAGGCGACCTTGAAATTGCATCTTTGAGGTCCGCACAGCAGCG
Internal bar code:GTCCACAGGATCAGTACTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1670
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TATAGCTGCGCGTGTGTAGG
Suggested primer 2:ATGGCGCAGAGGTCATAGTG