Insertion junction: CLIP2.062676_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062676
Chromosome:chromosome 8
Location:4037498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382689 (1 of 4) K08770 - ubiquitin C (UBC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGGTCTCGGAATACACACTACGGGACTACGCAATACTGCCACTTAC
Internal bar code:TGAGGGGCAGTTTAGTCGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:403
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACTATACCGCTGCTGCTGC
Suggested primer 2:TGTGAAACGAGGGACTGTCG