Insertion junction: CLIP2.062676_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062676
Chromosome:chromosome 8
Location:4037503
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382689 (1 of 4) K08770 - ubiquitin C (UBC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGTAACGGTGCAAGTGCGGCCGGCAAGGCCCATTCCTTTTCGGCTC
Internal bar code:ACTGGTTTTTGTCCTAGGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAAACGAGGGACTGTCG
Suggested primer 2:TACTATACCGCTGCTGCTGC