Insertion junction: CLIP2.062686_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062686
Chromosome:chromosome 14
Location:3827231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632400 SSA19 cilia-sensing, structure and/or assembly; (1 of 2) PTHR21131//PTHR21131:SF0 - SERINE-TYPE ENDOPEPTIDASE INHIBITOR // SEMINAL FLUID PROTEIN 33A3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCGACGGTGGGTGGTCGCCTGGTGGAGTGGAGGATGAAGGGGGCGCT
Internal bar code:TAAACGGGGTTCTCTACTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3340
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTATGCGTGCTAGCGA
Suggested primer 2:TCATCACCTCCCTGCCAAAC