Insertion junction: CLIP2.062689_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062689
Chromosome:chromosome 6
Location:6132723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291500 RWP6 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGTTTGAAAACGCCACGATAAGCTATGGCAATCCTGATGTGCAATT
Internal bar code:ATCGTTTTTTCTTCTTGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:836
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCATGGCCATGTAAATG
Suggested primer 2:TTTGCGTGGCATTTGTGAGG