Insertion junction: CLIP2.062689_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062689
Chromosome:chromosome 6
Location:6132723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291500 RWP6 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTATTGAAGTTCGGGCCATGTACACTTCGACGCCAAAGCCAGGGCCGT
Internal bar code:ATCGTTTTTTCTTCTTGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5192
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGTGGCATTTGTGAGG
Suggested primer 2:CCGCCATGGCCATGTAAATG