Insertion junction: CLIP2.062690_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062690
Chromosome:chromosome 6
Location:3971337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278204 (1 of 4) PTHR10334//PTHR10334:SF224 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACGAAAAAGTGGCGCCTGCTCGACAAAATCTAATTGAGACACGGAAG
Internal bar code:TCGCGATCAACTTTTGGTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2106
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAATCTGTGCGAGCTGC
Suggested primer 2:TCACACGTGTTCCGGTACTG