Insertion junction: CLIP2.062692_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062692
Chromosome:chromosome 11
Location:1080594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467670 GT90F44,GT90-44 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 44 3'UTR
Cre11.g467671 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGTGTCCCCAGCAGCCGCTGTAAAGTAGACACGAAACCTAGTATTG
Internal bar code:GCGCTTTGAGGTTTGCCTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGATAGAAATGGCGCGCGTA
Suggested primer 2:AAACACTGCGCAAACGTCTC