Insertion junction: CLIP2.062699_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062699
Chromosome:chromosome 8
Location:1393722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364200 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCAAACTGCAGCGCCTTAGTGGAGGAAATTCGGTCCTCAGATGCGC
Internal bar code:TGGAATAAGTTGTCTAAACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:4344
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCAAGTGGAGCGGCTGAT
Suggested primer 2:CCCATGCGCATTACAGAAGC