Insertion junction: CLIP2.062703_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062703
Chromosome:chromosome 14
Location:4122716
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g633850 (1 of 1) PF14768 - Replication protein A interacting C-terminal (RPA_interact_C) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATGTGCGACCAGCCTGGCGAGCCTGCAGGTGCTGCTGCCAGACTTGG
Internal bar code:TTGCGCAAGCGATGTGGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:788
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGGAGCACAAGGGGAAG
Suggested primer 2:ACTCCCCACCCTCCAGTATC