Insertion junction: CLIP2.062712_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062712
Chromosome:chromosome 6
Location:7267122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298950 (1 of 2) PF10343 - Potential Queuosine, Q, salvage protein family (Q_salvage) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGTGATCATATCCACAAGCACTATGCTTGAGCTGTATAGAAAGCTTT
Internal bar code:GACGCGCCTAAGTTTAAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2257
LEAP-Seq percent confirming:90.6977
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGGAGAGTCACCGAGCA
Suggested primer 2:GTTTGGTCTTTGGACGGTGC