Insertion junction: CLIP2.062716_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062716
Chromosome:chromosome 3
Location:3369253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166350 (1 of 1) IPR017849//IPR017850 - Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTGGCGACCGCCCACGCCATGGCCAGGCTGGTGTGCTCGGGTTGTG
Internal bar code:CCAGTGCTCAAAGGCCCGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3311
LEAP-Seq percent confirming:39.1304
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAACGGAAGACCCCCTC
Suggested primer 2:TGTGGTACTTTGCTCCCGTC