Insertion junction: CLIP2.062726_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062726
Chromosome:chromosome 12
Location:1569092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487400 (1 of 2) PF03556//PF14555 - Cullin binding (Cullin_binding) // UBA-like domain (UBA_4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTTGGGGCGTCTGAACTACATACGATTTGGACACTCCGCCATCCAAC
Internal bar code:AAAACGTGGGCCGTGCGAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGCGTGGTTGTGAAG
Suggested primer 2:CACCTTGTGTCTGTTGCGTG