Insertion junction: CLIP2.062729_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062729
Chromosome:chromosome 14
Location:571361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611700 PLAP8,PLP8 Plastid lipid associated protein 8; (1 of 1) PF01476//PF04755 - LysM domain (LysM) // PAP_fibrillin (PAP_fibrillin) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTCCTACTCAGTTGTGTTGCAGACAAGGTCGTTTTCCTTGTGGCGAT
Internal bar code:AGTTAGCCTGGCGACTCTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2805
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCATCTGAACGGAGGCAA
Suggested primer 2:AGAAGGAAGAAACGCGCTCA