Insertion junction: CLIP2.062734_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062734
Chromosome:mitogenome
Location:8023
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreMt.g802342 nad6,801500,ChrepMp06 (1 of 1) K03884 - NADH-ubiquinone oxidoreductase chain 6 (ND6); NADH dehydrogenase subunit 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGACTTGGTGTATCCTACGGCAATGCTTAGCAAAGCGCACAACAAAAT
Internal bar code:GGATGTGTTTGATGGCACTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGCCCCAATGCACATGT
Suggested primer 2:CCAGCCGAGCATCCTATGAG