Insertion junction: CLIP2.062742_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062742
Chromosome:chromosome 2
Location:636945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077650 (1 of 2) IPR000340//IPR000387//IPR029021 - Dual specificity phosphatase, catalytic domain // Tyrosine specific protein phosphatases domain // Protein-tyrosine phosphatase-like 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGTCGCGGTTAGTCCCGCAAAGAACGCAGGCAGCATACATGCGCCGC
Internal bar code:CTGCTTTAACTTAGATTTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCCCCTGACTCAGACGT
Suggested primer 2:TGCACTGTCGCACTTATGGT